% % This file was created by the TYPO3 extension % publications % --- Timezone: CEST % Creation date: 2024-03-03 % Creation time: 10:45:57 % --- Number of references % 106 % @Article { 993396034614_2023, author = {Traut, Walther and Sahara, Ken and Ffrench-Constant, Richard}, title = {Lepidopteran Synteny Units reveal deep chromosomal conservation in butterflies and moths}, year = {2023}, DOI = {https://doi.org/10.1093/g3journal/jkad134}, journal = {G3 Genes|Genomes|Genetics - Oxford Academic} } @Article { 591326906909_2022, author = {Kuenstner, Axel and Busch, Hauke and Hartmann, Enno and Traut, Walther}, title = {Data on draft genomes and transcriptomes from females and males of the flour moth, Ephestia kuehniella}, year = {2022}, DOI = {https://doi.org/10.1016/j.dib.2022.108140}, journal = {Data in Brief} } @Article { pauwels2021proteomic, author = {Provinciael, Becky and Schols, Dominique and Hartmann, Enno and Vermeire, Kurt and others}, title = {A Proteomic Study on the Membrane Protein Fraction of T Cells Confirms High Substrate Selectivity for the ER Translocation Inhibitor Cyclotriazadisulfonamide Mol Cell Proteomics}, year = {2021}, month = {09}, day = {02}, journal = {Molecular Cellular Proteomics}, publisher = {Elsevier}, pages = {100144} } @Article { liu2020importin, author = {Qadri, Fatimunnisa and Hartmann, Enno and Bader, Michael and Rother, Franziska and others}, title = {Importin α7 deficiency causes infertility in male mice by disrupting spermatogenesis Development}, year = {2021}, month = {09}, day = {02}, journal = {bioRxiv}, publisher = {Cold Spring Harbor Laboratory} } @Article { thiele2020cellular, author = {Thiele, Swantje and Stanelle-Bertram, Stephanie and Beck, Sebastian and Kouassi, Nancy Mounogou and Zickler, Martin and M{\{\dq}u}ller, Martin and Tuku, Berfin and Resa-Infante, Patricia and Riel, Debby and Alawi, Malik and others}, title = {Cellular importin-α3 expression dynamics in the lung regulate antiviral response pathways against influenza A virus infection}, year = {2020}, journal = {Cell reports}, volume = {31}, publisher = {Elsevier}, pages = {107549}, number = {3} } @Article { marvaldi2020importin, author = {Marvaldi, Letizia and Panayotis, Nicolas and Alber, Stefanie and Dagan, Shachar Y and Okladnikov, Nataliya and Koppel, Indrek and Di Pizio, Agostina and Song, Didi-Andreas and Tzur, Yarden and Terenzio, Marco and others}, title = {Importin α3 regulates chronic pain pathways in peripheral sensory neurons}, year = {2020}, journal = {Science}, volume = {369}, publisher = {American Association for the Advancement of Science}, pages = {842--846}, number = {6505} } @Article { nass2020cellulo, author = {Nass, Karol and Redecke, Lars and Perbandt, M and Yefanov, O and Klinge, M and Koopmann, R and Stellato, F and Gabdulkhakov, A and Sch{\{\dq}o}nherr, R and Rehders, D and others}, title = {In cellulo crystallization of Trypanosoma brucei IMP dehydrogenase enables the identification of genuine co-factors}, year = {2020}, journal = {Nature communications}, volume = {11}, publisher = {Nature Publishing Group}, pages = {1--13}, number = {1} } @Article { martin2020whole, author = {Martin, Simon H and Singh, Kumar Saurabh and Gordon, Ian J and Omufwoko, Kennedy Saitoti and Collins, Steve and Warren, Ian A and Munby, Hannah and Brattstr{\{\dq}o}m, Oskar and Traut, Walther and Martins, Dino J and others}, title = {Whole-chromosome hitchhiking driven by a male-killing endosymbiont}, year = {2020}, journal = {PLoS biology}, volume = {18}, publisher = {Public Library of Science San Francisco, CA USA}, pages = {e3000610}, number = {2} } @Article { traut2019activity, author = {Traut, W and Schubert, V and Dalikov{\'a}, M and Marec, F and Sahara, K}, title = {Activity and inactivity of moth sex chromosomes in somatic and meiotic cells}, year = {2019}, journal = {Chromosoma}, volume = {128}, publisher = {Springer}, pages = {533--545}, number = {4} } @Article { smith2019neo, author = {Smith, David AS and Traut, Walther and Martin, Simon H and Ireri, Piera and Omufwoko, Kennedy S and Gordon, Ian J and others}, title = {Neo Sex Chromosomes, Colour Polymorphism and Male-Killing in the African Queen Butterfly, Danaus chrysippus (L.)}, year = {2019}, journal = {Insects}, volume = {10}, publisher = {Multidisciplinary Digital Publishing Institute}, pages = {291}, number = {9} } @Article { sowa2018karyopherin, author = {Sowa, Anna Sergeevna and Martin, Elodie and Martins, In{\^e}s Morgado and Schmidt, Jana and Depping, Reinhard and Weber, Jonasz Jeremiasz and Rother, Franziska and Hartmann, Enno and Bader, Michael and Riess, Olaf and others}, title = {Karyopherin α-3 is a key protein in the pathogenesis of spinocerebellar ataxia type 3 controlling the nuclear localization of ataxin-3}, year = {2018}, journal = {Proceedings of the National Academy of Sciences}, volume = {115}, publisher = {National Acad Sciences}, pages = {E2624--E2633}, number = {11} } @Article { panayotis2018importin, author = {Panayotis, Nicolas and Sheinin, Anton and Dagan, Shachar Y and Tsoory, Michael M and Rother, Franziska and Vadhvani, Mayur and Meshcheriakova, Anna and Koley, Sandip and Marvaldi, Letizia and Song, Didi-Andreas and others}, title = {Importin α5 regulates anxiety through MeCP2 and sphingosine kinase 1}, year = {2018}, journal = {Cell reports}, volume = {25}, publisher = {Elsevier}, pages = {3169--3179}, number = {11} } @Article { dohner2018importin, author = {D{\{\dq}o}hner, Katinka and Ramos-Nascimento, Ana and Bialy, Dagmara and Anderson, Fenja and Hickford-Martinez, Ana and Rother, Franziska and Koithan, Thalea and Rudolph, Kathrin and Buch, Anna and Prank, Ute and others}, title = {Importin α1 is required for nuclear import of herpes simplex virus proteins and capsid assembly in fibroblasts and neurons}, year = {2018}, journal = {PLoS pathogens}, volume = {14}, publisher = {Public Library of Science}, pages = {e1006823}, number = {1} } @Article { 8081798, author = {De Mulder, Elke and Eisenbarth, Thomas and Schaumont, Patrick}, title = {Identifying and Eliminating Side-Channel Leaks in Programmable Systems}, year = {2018}, month = {Feb}, issn = {2168-2356}, DOI = {10.1109/MDAT.2017.2766166}, journal = {IEEE Design Test}, volume = {35}, pages = {74-89}, number = {1}, keywords = {security of data;side-channel leaks identification;side-channel leaks elimination;programmable systems;Threshold current;Power system reliability;Power distribution;Side-channel attacks;Microprocessors;Side-channel Leakage;Side-channel Analysis;Differential Power Analysis;Side-channel Countermeasures;Hiding;Masking;Threshold Implementation;Re-Keying;Side-channel Leakage Testing} } @Article { 8081798, author = {De Mulder, Elke and Eisenbarth, Thomas and Schaumont, Patrick}, title = {Identifying and Eliminating Side-Channel Leaks in Programmable Systems}, year = {2018}, month = {Feb}, issn = {2168-2356}, DOI = {10.1109/MDAT.2017.2766166}, journal = {IEEE Design Test}, volume = {35}, pages = {74-89}, number = {1}, keywords = {security of data;side-channel leaks identification;side-channel leaks elimination;programmable systems;Threshold current;Power system reliability;Power distribution;Side-channel attacks;Microprocessors;Side-channel Leakage;Side-channel Analysis;Differential Power Analysis;Side-channel Countermeasures;Hiding;Masking;Threshold Implementation;Re-Keying;Side-channel Leakage Testing} } @Article { kunz2017cell, author = {Kunz, Natalia and Xia, Brent T and Kalies, Kai-Uwe and Klinger, Matthias and Gemoll, Timo and Habermann, Jens K and Whitacre, Brynne E and Seitz, Aaron P and Kalies, Kathrin and Caldwell, Charles C}, title = {Cell-derived nanoparticles are endogenous modulators of sepsis with therapeutic potential}, year = {2017}, journal = {Shock (Augusta, Ga.)}, volume = {48}, publisher = {NIH Public Access}, pages = {346}, number = {3} } @Article { majoul2017drebrins, author = {Majoul, Irina V and Ernesti, Justus S and Butkevich, Eugenia V and Duden, Rainer}, title = {Drebrins and Connexins: A Biomedical Perspective}, year = {2017}, journal = {Drebrin}, publisher = {Springer}, pages = {225--247} } @Article { traut2017karyotypes, author = {Traut, Walther and Ahola, Virpi and Smith, David AS and Gordon, Ian J and others}, title = {Karyotypes versus genomes: the nymphalid butterflies Melitaea cinxia, Danaus plexippus, and D. chrysippus}, year = {2017}, journal = {Cytogenetic and genome research}, volume = {153}, publisher = {Karger Publishers}, pages = {46--53}, number = {1} } @Article { kunz2017nanoparticles, author = {Kunz, Natalia and Hauenschild, Eva and Maass, Sebastian and Kalies, Kai-Uwe and Klinger, Matthias and Barra, Melanie and Hecht, Lars and Helbig, Franz and Soellner, Stefan and Caldwell, Charles C and others}, title = {Nanoparticles prepared from porcine cells support the healing of cutaneous inflammation in mice and wound re-epithelialization in human skin}, year = {2017}, journal = {Experimental dermatology}, volume = {26}, publisher = {Wiley Online Library}, pages = {1199--1206}, number = {12} } @Article { smith2016neo, author = {Smith, David AS and Gordon, Ian J and Traut, Walther and Herren, Jeremy and Collins, Steve and Martins, Dino J and Saitoti, Kennedy and Ireri, Piera and Ffrench-Constant, Richard}, title = {A neo-W chromosome in a tropical butterfly links colour pattern, male-killing, and speciation}, year = {2016}, journal = {Proceedings of the Royal Society B: Biological Sciences}, volume = {283}, publisher = {The Royal Society}, pages = {20160821}, number = {1835} } @Article { kanost2016multifaceted, author = {Kanost, Michael R and Arrese, Estela L and Cao, Xiaolong and Chen, Yun-Ru and Chellapilla, Sanjay and Goldsmith, Marian R and Grosse-Wilde, Ewald and Heckel, David G and Herndon, Nicolae and Jiang, Haobo and others}, title = {Multifaceted biological insights from a draft genome sequence of the tobacco hornworm moth, Manduca sexta}, year = {2016}, journal = {Insect biochemistry and molecular biology}, volume = {76}, publisher = {Elsevier}, pages = {118--147} } @Article { laemmermann2016mitochondrial, author = {Laemmermann, Katrin and Vogel, Heiko and Traut, Walther}, title = {The mitochondrial genome of the Mediterranean flour moth, Ephestia kuehniella (Lepidoptera: Pyralidae), and identification of invading mitochondrial sequences (numts) in the W chromosome}, year = {2016}, journal = {European Journal of Entomology}, volume = {113}, publisher = {Czech Academy of Sciences, Institute of Entomology}, pages = {482--488} } @Article { janssen2016murine, author = {Jan{\{\dq}s}en, Linda and Ramnarayan, Venkat Raman and Aboelmagd, Mohamed and Iliopoulou, Maro and Hein, Zeynep and Majoul, Irina and Fritzsche, Susanne and Halenius, Anne and Springer, Sebastian}, title = {The murine cytomegalovirus immunoevasin gp40 binds MHC class I molecules to retain them in the early secretory pathway}, year = {2016}, journal = {Journal of cell science}, volume = {129}, publisher = {The Company of Biologists Ltd}, pages = {219--227}, number = {1} } @Article { schonherr2015real, author = {Sch{\{\dq}o}nherr, R and Klinge, M and Rudolph, JM and Fita, K and Rehders, D and L{\{\dq}u}bber, F and Schneegans, S and Majoul, IV and Duszenko, M and Betzel, C and others}, title = {Real-time investigation of dynamic protein crystallization in living cells}, year = {2015}, journal = {Structural dynamics}, volume = {2}, publisher = {American Crystallographic Association}, pages = {041712}, number = {4} } @Article { suckling2015structural, author = {Suckling, Richard J and Poon, Pak Phi and Travis, Sophie M and Majoul, Irina V and Hughson, Frederick M and Evans, Philip R and Duden, Rainer and Owen, David J}, title = {Structural basis for the binding of tryptophan-based motifs by δ-COP}, year = {2015}, journal = {Proceedings of the National Academy of Sciences}, volume = {112}, publisher = {National Acad Sciences}, pages = {14242--14247}, number = {46} } @Article { vermeire2015ribonuclease, author = {Vermeire, Kurt and Allan, Susanne and Provinciael, Becky and Hartmann, Enno and Kalies, Kai-Uwe}, title = {Ribonuclease-neutralized pancreatic microsomal membranes from livestock for in vitro co-translational protein translocation}, year = {2015}, journal = {Analytical biochemistry}, volume = {484}, publisher = {Elsevier}, pages = {102--104} } @Article { kalies2015inhibitors, author = {Kalies, Kai-Uwe and R{\{\dq}o}misch, Karin}, title = {Inhibitors of protein translocation across the ER membrane}, year = {2015}, journal = {Traffic}, volume = {16}, publisher = {Wiley Online Library}, pages = {1027--1038}, number = {10} } @Article { braunstein2015proteasomal, author = {Braunstein, Ilana and Zach, Lolita and Allan, Susanne and Kalies, Kai-Uwe and Stanhill, Ariel}, title = {Proteasomal degradation of preemptive quality control (pQC) substrates is mediated by an AIRAPL--p97 complex}, year = {2015}, journal = {Molecular biology of the cell}, volume = {26}, publisher = {Am Soc Cell Biol}, pages = {3719--3727}, number = {21} } @Article { gabriel2015importin, author = {Gabriel, G{\{\dq}u}lsah and Feldmann, Friederike and Reimer, Rudolph and Thiele, Swantje and Fischer, Meike and Hartmann, Enno and Bader, Michael and Ebihara, Hideki and Hoenen, Thomas and Feldmann, Heinz}, title = {Importin-α7 is involved in the formation of Ebola virus inclusion bodies but is not essential for pathogenicity in mice}, year = {2015}, journal = {The Journal of infectious diseases}, volume = {212}, publisher = {Infectious Diseases Society of America}, pages = {S316--S321}, number = {suppl\_2} } @Article { butkevich2015drebrin, author = {Butkevich, Eugenia and Bodensiek, Kai and Fakhri, Nikta and Von Roden, Kerstin and Schaap, Iwan AT and Majoul, Irina and Schmidt, Christoph F and Klopfenstein, Dieter R}, title = {Drebrin-like protein DBN-1 is a sarcomere component that stabilizes actin filaments during muscle contraction}, year = {2015}, journal = {Nature communications}, volume = {6}, publisher = {Nature Publishing Group}, pages = {1--12}, number = {1} } @Article { isken2014functional, author = {Isken, Olaf and Langerwisch, Ulrike and Sch{\{\dq}o}nherr, Robert and Lamp, Benjamin and Schr{\{\dq}o}der, Kristin and Duden, Rainer and R{\{\dq}u}menapf, Tillmann H and Tautz, Norbert}, title = {Functional characterization of bovine viral diarrhea virus nonstructural protein 5A by reverse genetic analysis and live cell imaging}, year = {2014}, journal = {Journal of virology}, volume = {88}, publisher = {Am Soc Microbiol}, pages = {82--98}, number = {1} } @Article { hugel2014identification, author = {H{\{\dq}u}gel, Stefanie and Depping, Reinhard and Dittmar, Gunnar and Rother, Franziska and Cabot, Ryan and Sury, Matthias D and Hartmann, Enno and Bader, Michael}, title = {Identification of importin α 7 specific transport cargoes using a proteomic screening approach}, year = {2014}, journal = {Molecular \{\\&} Cellular Proteomics}, volume = {13}, publisher = {Elsevier}, pages = {1286--1298}, number = {5} } @Article { springer2014regulated, author = {Springer, Sebastian and Malkus, Per and Borchert, Britta and Wellbrock, Ursula and Duden, Rainer and Schekman, Randy}, title = {Regulated oligomerization induces uptake of a membrane protein into COPII vesicles independent of its cytosolic tail}, year = {2014}, journal = {Traffic}, volume = {15}, publisher = {Wiley Online Library}, pages = {531--545}, number = {5} } @Article { vermeire2014signal, author = {Vermeire, Kurt and Bell, Thomas W and Van Puyenbroeck, Victor and Giraut, Anne and Noppen, Sam and Liekens, Sandra and Schols, Dominique and Hartmann, Enno and Kalies, Kai-Uwe and Marsh, Mark}, title = {Signal peptide-binding drug as a selective inhibitor of co-translational protein translocation}, year = {2014}, journal = {PLoS Biol}, volume = {12}, publisher = {Public Library of Science}, pages = {e1002011}, number = {12} } @Article { majoul2013fast, author = {Majoul, Irina V and Gao, Liang and Betzig, Eric and Onichtchouk, Daria and Butkevich, Eugenia and Kozlov, Yuri and Bukauskas, Feliksas and Bennett, Michael VL and Lippincott-Schwartz, Jennifer and Duden, Rainer}, title = {Fast structural responses of gap junction membrane domains to AB5 toxins}, year = {2013}, journal = {Proceedings of the National Academy of Sciences}, volume = {110}, publisher = {National Acad Sciences}, pages = {E4125--E4133}, number = {44} } @Article { miller2013molecular, author = {Miller, Victoria J and Sharma, Prateek and Kudlyk, Tetyana A and Frost, Laura and Rofe, Adam P and Watson, Irene J and Duden, Rainer and Lowe, Martin and Lupashin, Vladimir V and Ungar, Daniel}, title = {Molecular insights into vesicle tethering at the Golgi by the conserved oligomeric Golgi (COG) complex and the golgin TATA element modulatory factor (TMF)}, year = {2013}, journal = {Journal of Biological Chemistry}, volume = {288}, publisher = {Elsevier}, pages = {4229--4240}, number = {6} } @Article { traut2013high, author = {Traut, Walther and Vogel, Heiko and Gl{\{\dq}o}ckner, Gernot and Hartmann, Enno and Heckel, David G}, title = {High-throughput sequencing of a single chromosome: a moth W chromosome}, year = {2013}, journal = {Chromosome research}, volume = {21}, publisher = {Springer}, pages = {491--505}, number = {5} } @Article { tretter2013erad, author = {Tretter, Thomas and Pereira, F{\'a}bio P and Ulucan, Ozlem and Helms, Volkhard and Allan, Susanne and Kalies, Kai-Uwe and R{\{\dq}o}misch, Karin}, title = {ERAD and protein import defects in a sec61 mutant lacking ER-lumenal loop 7}, year = {2013}, journal = {BMC cell biology}, volume = {14}, publisher = {Springer}, pages = {1--14}, number = {1} } @Article { kandaswamy2013ecmpred, author = {Kandaswamy, Krishna Kumar and Pugalenthi, Ganesan and Kalies, Kai-Uwe and Hartmann, Enno and Martinetz, Thomas}, title = {EcmPred: Prediction of extracellular matrix proteins based on random forest with maximum relevance minimum redundancy feature selection}, year = {2013}, journal = {Journal of theoretical biology}, volume = {317}, publisher = {Elsevier}, pages = {377--383} } @Article { willett2013cog, author = {Willett, Rose and Kudlyk, Tetyana and Pokrovskaya, Irina and Sch{\{\dq}o}nherr, Robert and Ungar, Daniel and Duden, Rainer and Lupashin, Vladimir}, title = {COG complexes form spatial landmarks for distinct SNARE complexes}, year = {2013}, journal = {Nature communications}, volume = {4}, publisher = {Nature Publishing Group}, pages = {1--13}, number = {1} } @Article { karsten2012anti, author = {Karsten, Christian M and Pandey, Manoj K and Figge, Julia and Kilchenstein, Regina and Taylor, Philip R and Rosas, Marcela and McDonald, Jacqueline U and Orr, Selinda J and Berger, Markus and Petzold, Dominique and others}, title = {Anti-inflammatory activity of IgG1 mediated by Fc galactosylation and association of FcγRIIB and dectin-1}, year = {2012}, journal = {Nature medicine}, volume = {18}, publisher = {Nature Publishing Group}, pages = {1401--1406}, number = {9} } @Article { jackson2012molecular, author = {Jackson, Lauren P and Lewis, Michael and Kent, Helen M and Edeling, Melissa A and Evans, Philip R and Duden, Rainer and Owen, David J}, title = {Molecular basis for recognition of dilysine trafficking motifs by COPI}, year = {2012}, journal = {Developmental cell}, volume = {23}, publisher = {Elsevier}, pages = {1255--1262}, number = {6} } @Article { buntrock2012organ, author = {Buntrock, Lydia and Marec, Franti{\v{s}}ek and Krueger, Sarah and Traut, Walther}, title = {Organ growth without cell division: somatic polyploidy in a moth, Ephestia kuehniella}, year = {2012}, journal = {Genome}, volume = {55}, publisher = {NRC Research Press}, pages = {755--763}, number = {9} } @Article { thoms2012peroxisome, author = {Thoms, Sven and Harms, Imke and Kalies, Kai-Uwe and G{\{\dq}a}rtner, Jutta}, title = {Peroxisome Formation Requires the Endoplasmic Reticulum Channel Protein Sec61}, year = {2012}, journal = {Traffic}, volume = {13}, publisher = {Wiley Online Library}, pages = {599--609}, number = {4} } @Article { sahara2012sex, author = {Sahara, Ken and Yoshido, Atsuo and Traut, Walther}, title = {Sex chromosome evolution in moths and butterflies}, year = {2012}, journal = {Chromosome Research}, volume = {20}, publisher = {Springer}, pages = {83--94}, number = {1} } @Article { kandaswamy2011blprot, author = {Kandaswamy, Krishna Kumar and Pugalenthi, Ganesan and Hazrati, Mehrnaz Khodam and Kalies, Kai-Uwe and Martinetz, Thomas}, title = {BLProt: prediction of bioluminescent proteins based on support vector machine and relieff feature selection}, year = {2011}, journal = {BMC bioinformatics}, volume = {12}, publisher = {Springer}, pages = {1--7}, number = {1} } @Article { gabriel2011differential, author = {Gabriel, G{\{\dq}u}lsah and Klingel, Karin and Otte, Anna and Thiele, Swantje and Hudjetz, Ben and Arman-Kalcek, G{\{\dq}o}khan and Sauter, Martina and Shmidt, Tatiana and Rother, Franziska and Baumgarte, Sigrid and others}, title = {Differential use of importin-α isoforms governs cell tropism and host adaptation of influenza virus}, year = {2011}, journal = {Nature communications}, volume = {2}, publisher = {Nature Publishing Group}, pages = {1--7}, number = {1} } @Article { rother2011importin, author = {Rother, Franziska and Shmidt, Tatiana and Popova, Elena and Krivokharchenko, Alexander and H{\{\dq}u}gel, Stefanie and Vilianovich, Larissa and Ridders, Michael and Tenner, Katja and Alenina, Natalia and K{\{\dq}o}hler, Matthias and others}, title = {Importin α7 is essential for zygotic genome activation and early mouse development}, year = {2011}, journal = {PLoS One}, volume = {6}, publisher = {Public Library of Science}, pages = {e18310}, number = {3} } @Article { kumar2010prediction, author = {Kumar Kandaswamy, Krishna and Pugalenthi, Ganesan and Moller, Steffen and Hartmann, Enno and Uwe Kalies, Kai and N Suganthan, P and Martinetz, Thomas}, title = {Prediction of apoptosis protein locations with genetic algorithms and support vector machines through a new mode of pseudo amino acid composition}, year = {2010}, journal = {Protein and Peptide Letters}, volume = {17}, publisher = {Bentham Science Publishers}, pages = {1473--1479}, number = {12} } @Article { marec2010rise, author = {Marec, Franti{\v{s}}ek and Sahara, Ken and Traut, Walther and Goldsmith, MR}, title = {Rise and fall of the W chromosome in Lepidoptera}, year = {2010}, journal = {Molecular biology and genetics of the lepidoptera}, volume = {3}, publisher = {CRC press}, pages = {49--63} } @Article { kandaswamy2010spred, author = {Kandaswamy, Krishna Kumar and Pugalenthi, Ganesan and Hartmann, Enno and Kalies, Kai-Uwe and Moller, Steffen and Suganthan, PN and Martinetz, Thomas}, title = {SPRED: A machine learning approach for the identification of classical and non-classical secretory proteins in mammalian genomes}, year = {2010}, journal = {Biochemical and biophysical research communications}, volume = {391}, publisher = {Elsevier}, pages = {1306--1311}, number = {3} } @Article { traut2010new, author = {Traut, Walther}, title = {New Y chromosomes and early stages of sex chromosome differentiation: sex determination in Megaselia}, year = {2010}, journal = {Journal of genetics}, volume = {89}, publisher = {Springer}, pages = {307--313}, number = {3} } @Article { brown2010hp1gamma, author = {Brown, Jeremy P and Bullwinkel, J{\{\dq}o}rn and Baron-L{\{\dq}u}hr, Bettina and Billur, Mustafa and Schneider, Philipp and Winking, Heinz and Singh, Prim B}, title = {HP1γ function is required for male germ cell survival and spermatogenesis}, year = {2010}, journal = {Epigenetics \{\\&} chromatin}, volume = {3}, publisher = {BioMed Central}, pages = {1--9}, number = {1} } @Article { cherkasov2010new, author = {Cherkasov, Dmitry and Biet, Thorsten and Bäuml, Englbert and Traut, Walther and Lohoff, Michael}, title = {New nucleotide analogues with enhanced signal properties}, year = {2010}, journal = {Bioconjugate chemistry}, volume = {21}, publisher = {ACS Publications}, pages = {122--129}, number = {1} } @Article { steinhoff2009cellular, author = {Steinhoff, Amrei and Pientka, Friederike Katharina and M{\{\dq}o}ckel, Sylvia and Kettelhake, Antje and Hartmann, Enno and K{\{\dq}o}hler, Matthias and Depping, Reinhard}, title = {Cellular oxygen sensing: Importins and exportins are mediators of intracellular localisation of prolyl-4-hydroxylases PHD1 and PHD2}, year = {2009}, journal = {Biochemical and biophysical research communications}, volume = {387}, publisher = {Elsevier}, pages = {705--711}, number = {4} } @Article { majoul2009limiting, author = {Majoul, Irina V and Onichtchouk, Daria and Butkevich, Eugenia and Wenzel, Dirk and Chailakhyan, Levon M and Duden, Rainer}, title = {Limiting transport steps and novel interactions of Connexin-43 along the secretory pathway}, year = {2009}, journal = {Histochemistry and cell biology}, volume = {132}, publisher = {Springer}, pages = {263--280}, number = {3} } @Article { weichenhan2008mouse, author = {Weichenhan, Dieter and Traut, Walther and G{\{\dq}o}ngrich, Christina and Himmelbauer, Heinz and Busch, L{\{\dq}u}der and Monyer, Hannah and Winking, Heinz}, title = {A mouse translocation associated with Caspr5-2 disruption and perinatal lethality}, year = {2008}, journal = {Mammalian Genome}, volume = {19}, publisher = {Springer}, pages = {675--686}, number = {10} } @Article { kalies2008single, author = {Kalies, Kai-Uwe and Stokes, Vivica and Hartmann, Enno}, title = {A single Sec61-complex functions as a protein-conducting channel}, year = {2008}, journal = {Biochimica et Biophysica Acta (BBA)-Molecular Cell Research}, volume = {1783}, publisher = {Elsevier}, pages = {2375--2383}, number = {12} } @Article { depping2008nuclear, author = {Depping, Reinhard and Steinhoff, Amrei and Schindler, Susann G and Friedrich, Beate and Fagerlund, Riku and Metzen, Eric and Hartmann, Enno and K{\{\dq}o}hler, Matthias}, title = {Nuclear translocation of hypoxia-inducible factors (HIFs): involvement of the classical importin α/β pathway}, year = {2008}, journal = {Biochimica et Biophysica Acta (BBA)-Molecular Cell Research}, volume = {1783}, publisher = {Elsevier}, pages = {394--404}, number = {3} } @Article { linder2008tdrd3, author = {Linder, Bastian and Pl{\{\dq}o}ttner, Oliver and Kroiss, Matthias and Hartmann, Enno and Laggerbauer, Bernhard and Meister, Gunter and Keidel, Eva and Fischer, Utz}, title = {Tdrd3 is a novel stress granule-associated protein interacting with the Fragile-X syndrome protein FMRP}, year = {2008}, journal = {Human molecular genetics}, volume = {17}, publisher = {Oxford University Press}, pages = {3236--3246}, number = {20} } @Article { shmidt2007normal, author = {Shmidt, Tatjana and Hampich, Franziska and Ridders, Michael and Schultrich, Stefanie and Hans, Volkmar H and Tenner, Katja and Vilianovich, Larissa and Qadri, Fatimunnisa and Alenina, Natalia and Hartmann, Enno and others}, title = {Normal brain development in importin-α5 deficient-mice}, year = {2007}, journal = {Nature cell biology}, volume = {9}, publisher = {Nature Publishing Group}, pages = {1337--1338}, number = {12} } @Article { fukova2007probing, author = {Fukov{\'a}, Iva and Traut, Walther and V{\'i}tkov{\'a}, Magda and Nguyen, Petr and Kub{\'i}{\v{c}}kov{\'a}, Svatava and Marec, Franti{\v{s}}ek}, title = {Probing the W chromosome of the codling moth, Cydia pomonella, with sequences from microdissected sex chromatin}, year = {2007}, journal = {Chromosoma}, volume = {116}, publisher = {Springer}, pages = {135}, number = {2} } @Article { traut2007sex, author = {Traut, W and Sahara, K and Marec, F}, title = {Sex chromosomes and sex determination in Lepidoptera}, year = {2007}, journal = {Sexual Development}, volume = {1}, publisher = {Karger Publishers}, pages = {332--346}, number = {6} } @Article { traut2007telomere, author = {Traut, Walther and Szczepanowski, Monika and V{\'i}tkov{\'a}, Magda and Opitz, Christian and Marec, Franti{\v{s}}ek and Zrzav{\'y}, Jan}, title = {The telomere repeat motif of basal Metazoa}, year = {2007}, journal = {Chromosome research}, volume = {15}, publisher = {Springer}, pages = {371--382}, number = {3} } @Article { traut2006new, author = {Traut, Walther and Weichenhan, Dieter and Himmelbauer, Heinz and Winking, Heinz}, title = {New members of the neurexin superfamily: multiple rodent homologues of the human CASPR5 gene}, year = {2006}, journal = {Mammalian genome}, volume = {17}, publisher = {Springer}, pages = {723--731}, number = {7} } @Article { traut2006phylogeny, author = {Traut, Walther and Niimi, Teruyuki and Ikeo, Kazuho and Sahara, Ken}, title = {Phylogeny of the sex-determining gene Sex-lethal in insects}, year = {2006}, journal = {Genome}, volume = {49}, publisher = {NRC Research Press Ottawa, Canada}, pages = {254--262}, number = {3} } @Article { friedrich2006nuclear, author = {Friedrich, Beate and Quensel, Christina and Sommer, Thomas and Hartmann, Enno and K{\{\dq}o}hler, Matthias}, title = {Nuclear localization signal and protein context both mediate importin α specificity of nuclear import substrates}, year = {2006}, journal = {Molecular and cellular biology}, volume = {26}, publisher = {Am Soc Microbiol}, pages = {8697--8709}, number = {23} } @Article { trautwein2006arf1p, author = {Trautwein, Mark and Schindler, Christina and Gauss, Robert and Dengjel, J{\{\dq}o}rn and Hartmann, Enno and Spang, Anne}, title = {Arf1p, Chs5p and the ChAPs are required for export of specialized cargo from the Golgi}, year = {2006}, journal = {The EMBO journal}, volume = {25}, publisher = {John Wiley \{\\&} Sons, Ltd Chichester, UK}, pages = {943--954}, number = {5} } @Article { stavru2006ndc1, author = {Stavru, Fabrizia and Hülsmann, Bastian B and Spang, Anne and Hartmann, Enno and Cordes, Volker C and G{\{\dq}o}rlich, Dirk}, title = {NDC1: a crucial membrane-integral nucleoporin of metazoan nuclear pore complexes}, year = {2006}, journal = {The Journal of cell biology}, volume = {173}, publisher = {Rockefeller University Press}, pages = {509--519}, number = {4} } @Article { niimi2006molecular, author = {Niimi, Teruyuki and Sahara, Ken and Oshima, Hiroyuki and Yasukochi, Yuji and Ikeo, Kazuho and Traut, Walther}, title = {Molecular cloning and chromosomal localization of the Bombyx Sex-lethal gene}, year = {2006}, journal = {Genome}, volume = {49}, publisher = {NRC Research Press Ottawa, Canada}, pages = {263--268}, number = {3} } @Article { hori2006deletion, author = {Hori, Osamu and Miyazaki, Mayuki and Tamatani, Takashi and Ozawa, Kentaro and Takano, Katsura and Okabe, Masaru and Ikawa, Masahito and Hartmann, Enno and Mai, Petra and Stern, David M and others}, title = {Deletion of SERP1/RAMP4, a component of the endoplasmic reticulum (ER) translocation sites, leads to ER stress}, year = {2006}, journal = {Molecular and cellular biology}, volume = {26}, publisher = {Am Soc Microbiol}, pages = {4257--4267}, number = {11} } @Article { pohlschroder2005diversity, author = {Pohlschr{\{\dq}o}der, Mechthild and Hartmann, Enno and Hand, Nicholas J and Dilks, Kieran and Haddad, Alex}, title = {Diversity and evolution of protein translocation}, year = {2005}, journal = {Annu. Rev. Microbiol.}, volume = {59}, publisher = {Annual Reviews}, pages = {91--111} } @Article { lariviere2005structural, author = {Larivi{\`e}re, Laurent and Sommer, Nicole and Mor{\'e}ra, Solange}, title = {Structural evidence of a passive base-flipping mechanism for AGT, an unusual GT-B glycosyltransferase}, year = {2005}, journal = {Journal of molecular biology}, volume = {352}, publisher = {Elsevier}, pages = {139--150}, number = {1} } @Article { vitkova2005evolutionary, author = {V{\'i}tkov{\'a}, Magda and Kr{\'a}l, Jir{\'i} and Traut, Walther and Zrzav{\'y}, Jan and Marec, Franti{\v{s}}ek}, title = {The evolutionary origin of insect telomeric repeats,(TTAGG) n}, year = {2005}, journal = {Chromosome research}, volume = {13}, publisher = {Springer}, pages = {145--156}, number = {2} } @Article { kalies2005protein, author = {Kalies, Kai-Uwe and Allan, Susanne and Sergeyenko, Tatiana and Kr{\{\dq}o}ger, Heike and R{\{\dq}o}misch, Karin}, title = {The protein translocation channel binds proteasomes to the endoplasmic reticulum membrane}, year = {2005}, journal = {The EMBO journal}, volume = {24}, publisher = {John Wiley \{\\&} Sons, Ltd Chichester, UK}, pages = {2284--2293}, number = {13} } @Article { van2004x, author = {Berg, Bert and Clemons, William M and Collinson, Ian and Modis, Yorgo and Hartmann, Enno and Harrison, Stephen C and Rapoport, Tom A}, title = {X-ray structure of a protein-conducting channel}, year = {2004}, journal = {Nature}, volume = {427}, publisher = {Nature Publishing Group}, pages = {36--44}, number = {6969} } @Incollection { traut2004sex, author = {Traut, Walther}, title = {Sex chromosome evolution: evidence from fish, fly and moth species}, year = {2004}, booktitle = {Chromosomes today}, publisher = {Springer}, pages = {73--82} } @Article { kageyama2004opposite, author = {Kageyama, Daisuke and Traut, Walther}, title = {Opposite sex--specific effects of Wolbachia and interference with the sex determination of its host Ostrinia scapulalis}, year = {2004}, journal = {Proceedings of the Royal Society of London. Series B: Biological Sciences}, volume = {271}, publisher = {The Royal Society}, pages = {251--258}, number = {1536} } @Article { quensel2004vivo, author = {Quensel, Christina and Friedrich, Beate and Sommer, Thomas and Hartmann, Enno and K{\{\dq}o}hler, Matthias}, title = {In vivo analysis of importin α proteins reveals cellular proliferation inhibition and substrate specificity}, year = {2004}, journal = {Molecular and cellular biology}, volume = {24}, publisher = {Am Soc Microbiol}, pages = {10246--10255}, number = {23} } @Article { winking2004expression, author = {Winking, H and Gerdes, J and Traut, W}, title = {Expression of the proliferation marker Ki-67 during early mouse development}, year = {2004}, journal = {Cytogenetic and genome research}, volume = {105}, publisher = {Karger Publishers}, pages = {251--256}, number = {2-4} } @Article { sommer2004bacteriophage, author = {Sommer, Nicole and Depping, Reinhard and Piotrowski, Markus and R{\{\dq}u}ger, Wolfgang}, title = {Bacteriophage T4 α-glucosyltransferase: a novel interaction with gp45 and aspects of the catalytic mechanism}, year = {2004}, journal = {Biochemical and biophysical research communications}, volume = {323}, publisher = {Elsevier}, pages = {809--815}, number = {3} } @Incollection { winking2004expression, author = {Winking, Heinz and Gerdes, Johannes and Traut, Walter}, title = {Expression and Chromatin Binding Specificity of Ki-67 in Male and Female Meiosis of the Mouse}, year = {2004}, booktitle = {Chromosomes Today}, publisher = {Springer}, pages = {85--91} } @Article { stuven2003exportin, author = {St{\{\dq}u}ven, Theis and Hartmann, Enno and G{\{\dq}o}rlich, Dirk}, title = {Exportin 6: a novel nuclear export receptor that is specific for profilin actin complexes}, year = {2003}, journal = {The EMBO journal}, volume = {22}, publisher = {John Wiley \{\\&} Sons, Ltd Chichester, UK}, pages = {5928--5940}, number = {21} } @Article { sahara2003moth, author = {Sahara, Ken and Marec, Franti ek and Eickhoff, Ulrike and Traut, Walther}, title = {Moth sex chromatin probed by comparative genomic hybridization (CGH)}, year = {2003}, journal = {Genome}, volume = {46}, publisher = {NRC Research Press Ottawa, Canada}, pages = {339--342}, number = {2} } @Article { dilks2003prokaryotic, author = {Dilks, Kieran and Rose, R Wesley and Hartmann, Enno and Pohlschr{\{\dq}o}der, Mechthild}, title = {Prokaryotic utilization of the twin-arginine translocation pathway: a genomic survey}, year = {2003}, journal = {Journal of bacteriology}, volume = {185}, publisher = {Am Soc Microbiol}, pages = {1478--1483}, number = {4} } @Article { hartmann2003enigma, author = {Hartmann, Enno and Hartmann, Roland K}, title = {The enigma of ribonuclease P evolution}, year = {2003}, journal = {TRENDS in Genetics}, volume = {19}, publisher = {Elsevier}, pages = {561--569}, number = {10} } @Article { dilcher2003use1p, author = {Dilcher, Meik and Veith, Beate and Chidambaram, Subbulakshmi and Hartmann, Enno and Schmitt, Hans Dieter and Mollard, Gabriele Fischer}, title = {Use1p is a yeast SNARE protein required for retrograde traffic to the ER}, year = {2003}, journal = {The EMBO journal}, volume = {22}, publisher = {John Wiley \{\\&} Sons, Ltd}, pages = {3664--3674}, number = {14} } @Article { bohnsack2002exp5, author = {Bohnsack, Markus T and Regener, Kathrin and Schwappach, Blanche and Saffrich, Rainer and Paraskeva, Efrosyni and Hartmann, Enno and G{\{\dq}o}rlich, Dirk}, title = {Exp5 exports eEF1A via tRNA from nuclei and synergizes with other transport pathways to confine translation to the cytoplasm}, year = {2002}, journal = {The EMBO journal}, volume = {21}, publisher = {John Wiley \{\\&} Sons, Ltd}, pages = {6205--6215}, number = {22} } @Article { traut2002temporal, author = {Traut, Walther and Endl, Elmar and Scholzen, Thomas and Gerdes, Johannes and Winking, Heinz}, title = {The temporal and spatial distribution of the proliferation associated Ki-67 protein during female and male meiosis}, year = {2002}, journal = {Chromosoma}, volume = {111}, publisher = {Springer}, pages = {156--164}, number = {3} } @Article { jakel2002importins, author = {J{\{\dq}a}kel, Stefan and Mingot, Jos{\'e}-Manuel and Schwarzmaier, Petra and Hartmann, Enno and G{\{\dq}o}rlich, Dirk}, title = {Importins fulfil a dual function as nuclear import receptors and cytoplasmic chaperones for exposed basic domains}, year = {2002}, journal = {The EMBO journal}, volume = {21}, publisher = {John Wiley \{\\&} Sons, Ltd}, pages = {377--386}, number = {3} } @Article { koehler2002differential, author = {Koehler, Matthias and Fiebeler, Anette and Hartwig, Maite and Thiel, Sebastian and Prehn, Siegfried and Kettritz, Ralph and Luft, Friedrich and Hartmann, Enno}, title = {Differential expression of classical nuclear transport factors during cellular proliferation and differentiation}, year = {2002}, journal = {Cellular Physiology and Biochemistry}, volume = {12}, publisher = {Karger Publishers}, pages = {335--344}, number = {5-6} } @Article { dalski2002complete, author = {Dalski, A and Hebinck, A and Winking, H and Butzmann, U and Schwinger, E and Z{\{\dq}u}hlke, Ch}, title = {Complete cDNA sequence, expression, alternative splicing, and genomic organization of the mouse Nfat5 gene}, year = {2002}, journal = {Cytogenetic and genome research}, volume = {97}, publisher = {Karger Publishers}, pages = {179--182}, number = {3-4} } @Article { traut2002chromatin, author = {Traut, Walther and Endl, Elmar and Garagna, Silvia and Scholzen, Thomas and Schwinger, Eberhard and Gerdes, Johannes and Winking, Heinz}, title = {Chromatin preferences of the perichromosomal layer constituent pKi-67}, year = {2002}, journal = {Chromosome Research}, volume = {10}, publisher = {Springer}, pages = {685--694}, number = {8} } @Article { lenk2002role, author = {Lenk, Uwe and Yu, Helen and Walter, Jan and Gelman, Marina S and Hartmann, Enno and Kopito, Ron R and Sommer, Thomas}, title = {A role for mammalian Ubc6 homologues in ER-associated protein degradation}, year = {2002}, journal = {Journal of cell science}, volume = {115}, publisher = {The Company of Biologists Ltd}, pages = {3007--3014}, number = {14} } @Article { kohler2001adenoviral, author = {K{\{\dq}o}hler, M and G{\{\dq}o}rlich, D and Hartmann, E and Franke, J}, title = {Adenoviral E1A protein nuclear import is preferentially mediated by importin α3 in vitro}, year = {2001}, journal = {Virology}, volume = {289}, publisher = {Elsevier}, pages = {186--191}, number = {2} } @Article { aso2001comparative, author = {Aso, Sunao and Miyabara, Shinichi and Sugihara, Hajime and Winking, Heinz}, title = {Comparative study of mouse trisomy 16 and bis-diamine treated fetuses: Discrimination of possible contribution of neural crest cells to malformations}, year = {2001}, journal = {Congenital anomalies}, volume = {41}, publisher = {Wiley Online Library}, pages = {169--176}, number = {3} } @Article { lubke2001complementation, author = {L{\{\dq}u}bke, Torben and Marquardt, Thorsten and Etzioni, Amos and Hartmann, Enno and Figura, Kurt and K{\{\dq}o}rner, Christian}, title = {Complementation cloning identifies CDG-IIc, a new type of congenital disorders of glycosylation, as a GDP-fucose transporter deficiency}, year = {2001}, journal = {Nature genetics}, volume = {28}, publisher = {Nature Publishing Group}, pages = {73--76}, number = {1} } @Article { franke2001evidence, author = {Franke, Jacqueline and Reimann, Barbara and Hartmann, Enno and K{\{\dq}o}hler, Matthias and Wiedmann, Brigitte}, title = {Evidence for a nuclear passage of nascent polypeptide-associated complex subunits in yeast}, year = {2001}, journal = {Journal of cell science}, volume = {114}, publisher = {The Company of Biologists Ltd}, pages = {2641--2648}, number = {14} } @Article { traut2001evolution, author = {Traut, Walther and Rahn, Irene M and Winking, Heinz and Kunze, B{\{\dq}a}rbel and Weichenhan, Dieter}, title = {Evolution of a 6--200 Mb long-range repeat cluster in the genus Mus}, year = {2001}, journal = {Chromosoma}, volume = {110}, publisher = {Springer}, pages = {247--252}, number = {4} } @Incollection { traut2001identification, author = {Traut, Walther and Eickhoff, Ulrike and Schorch, Jan-Christer}, title = {Identification and analysis of sex chromosomes by comparative genomic hybridization (CGH)}, year = {2001}, booktitle = {Chromosome painting}, publisher = {Springer}, pages = {155--161} } @Article { mingot2001importin, author = {Mingot, Jos{\'e}-Manuel and Kostka, Susanne and Kraft, Regine and Hartmann, Enno and G{\{\dq}o}rlich, Dirk}, title = {Importin 13: a novel mediator of nuclear import and export}, year = {2001}, journal = {The EMBO journal}, volume = {20}, publisher = {John Wiley \{\\&} Sons, Ltd}, pages = {3685--3694}, number = {14} } @Article { kohler2001increased, author = {K{\{\dq}o}hler, Matthias and Buchwalow, Igor B and Alexander, Gabriele and Christiansen, Marret and Shagdarsuren, Erdenechimeg and Samoilova, Vera and Hartmann, Enno and Mervaala, Eero MA and Haller, Hermann}, title = {Increased importin α protein expression in diabetic nephropathy}, year = {2001}, journal = {Kidney international}, volume = {60}, publisher = {Elsevier}, pages = {2263--2273}, number = {6} } @Article { traut2001meiotic, author = {Traut, Walther and Winking, Heinz}, title = {Meiotic chromosomes and stages of sex chromosome evolution in fish: zebrafish, platyfish and guppy}, year = {2001}, journal = {Chromosome Research}, volume = {9}, publisher = {Springer}, pages = {659--672}, number = {8} } @Article { marec2001meiotic, author = {Marec, Franti{\v{s}}ek and Tothov{\'a}, Alena and Sahara, Ken and Traut, Walther}, title = {Meiotic pairing of sex chromosome fragments and its relation to atypical transmission of a sex-linked marker in Ephestia kuehniella (Insecta: Lepidoptera)}, year = {2001}, journal = {Heredity}, volume = {87}, publisher = {Nature Publishing Group}, pages = {659--671}, number = {6} } @Article { meister2001smnrp, author = {Meister, Gunter and Hannus, Stefan and Pl{\{\dq}o}ttner, Oliver and Baars, Tonie and Hartmann, Enno and Fakan, Stanislav and Laggerbauer, Bernhard and Fischer, Utz}, title = {SMNrp is an essential pre-mRNA splicing factor required for the formation of the mature spliceosome}, year = {2001}, journal = {The EMBO journal}, volume = {20}, publisher = {John Wiley \{\\&} Sons, Ltd Chichester, UK}, pages = {2304--2314}, number = {9} } @Article { weichenhan2001source, author = {Weichenhan, Dieter and Kunze, B{\{\dq}a}rbel and Winking, Heinz and Geel, Michel and Osoegawa, Kazutoyo and Jong, Pieter J and Traut, Walther}, title = {Source and component genes of a 6--200 Mb gene cluster in the house mouse}, year = {2001}, journal = {Mammalian genome}, volume = {12}, publisher = {Springer}, pages = {590--594}, number = {8} }